Abstract:The Devonian marine and non marine deposits were widely distributed in East Yunnan, where rich marine faunas and floras were present. The Middle and early Upper Devonian miospores of Eastern Yunnan were also abundant and usually well- preserved. The present paper provides both analysis of qualitative and quantitative composition development of Middle and early Upper Devonian spore assemblage in Eastern Yunnan, and a palynological zonatlon containing four successive assemblage zones: 1.Zone of Calyptosporites velatus-Rhabdosporites langii (VL); 2. Zone of Archaeozonotriletes variabilis-Calyptosporites proteus (VP); 3. Zone of Geminospora lemurata-Cristatisporites triangulatus (LT); 4. Zone of Archaeoperisaccus ovalis-Lagenicula bullosum (OB). The Middle and early Upper Devonian spore assemblages of Eastern Yunnan may be compared with those in South China and West Qinling. The spore zonation possesses stratigraphical dating of the Devonian megafloras of the region, particularly those from the Middle and Upper Devonian. The proposed spore zonation is closely compared with that erected for the Middle and early Upper Devonian of Old Sandstone Continent and adjacent Region. Based on palynological data, the reconstruction of Paleogeography and Paleoecology are discussed.