Abstract:To screening bio-controlling fungi, which showed antagonism to sclerotinia from plant parasitized fungi of alfalfa, the antagonism among alfalfa associated fungi and sclerotinia were selected by confrontation test and filtrate test, and the controlling effect of alfalfa associated fungi on sclerotinia were measured by stem inoculation on pot plants. The results showed that Asteroma sp., sterile mycelium and Papulospora sp. among 22 fungi which isolated from alfalfa plants, showed remarkable suppression to sclerotinia. On the 5th day after inoculation, the colony diameter of sclerotinia, which were incubated on the medium containing the filtrate of these 3 fungi, were 4.8, 26.8 and 28.9 mm respectively, and they were depressed 75.2, 53.2 and 51.1 mm contrasted with that of control. Two fungi, Asteroma sp. and sterile mycelium, can’t control the invading abilities of sclerotinia to host plant, but the spreading speed of necrotic spot were suppressed after treating with these 2 fungi, and the inhibitory effect was different for different alfalfa varieties, both Asteroma sp. and sterile mycelium showed significant suppression to sclerotinia in variety FGC901 and Algonguin.