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Clone and Expression Analysis of Geraniol Synthase Gene in Pogostemon cablin

广藿香香叶醇合酶基因克隆及表达分析



全 文 :书!"#$%&
,2016,36(5):0896-0901
犃犮狋犪犅狅狋.犅狅狉犲犪犾.犗犮犮犻犱犲狀狋.犛犻狀.
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C D:XYZ[\(geraniolsynthase,GES)]XYZ^_`aSbcdef\,]ghijklfmn\。op
qrstXuvswpSf犌犈犛uvxyz{,|}~€‚$,ƒFRTPCRD„…†‡tX犌犈犛|
}f~cDNAyz。ˆ‰|}Š‹‡ŒfI$KŽ%G,‘F’“”•–—PCR„˜™‡犘犮犌犈犛1|
}š4›tXœžSŸ •¡¢、YSf£¤¥¦。§¨©ª:tX犌犈犛|}«¬­›®¯fORF°,
1734bp,±²577›³|´,µ¶·犘犮犌犈犛1,GenBank¸v¹·KF926075;犘犮犌犈犛1|}±²f³|´yzº»
¼犌犈犛|}±²f³|´yz½·Œ¾。tXGES¿À–ÁšYÂÃS,ÄÅÆÇÈ。犘犮犌犈犛1ÉešYS
£¤

ÊYS£¤—½Ë

̟ œžÍÎ
,犘犮犌犈犛1šÏÐtXÑËetXS£¤ÒӌÔ,šÕVtX
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犆犾狅狀犲犪狀犱犈狓狆狉犲狊狊犻狅狀犃狀犪犾狔狊犻狊狅犳犌犲狉犪狀犻狅犾犛狔狀狋犺犪狊犲犌犲狀犲
犻狀犘狅犵狅狊狋犲犿狅狀犮犪犫犾犻狀
OUYANGPuyue1,ZENGShaohua2,MOXiaolu1
(1GuangdongFoodandDrugVocationalColege,Guangzhou510520,China;2SouthChinaBotanicalGarden,ChineseAcademy
ofSciences,Guangzhou510650,China)
犃犫狊狋狉犪犮狋:Geraniolsynthase(GES),whichisveryimportanttothebiosynthesisofgeraniol,isoneofthe
keyenzymesinterpenoidspathways.Basedonthetranscriptomeanalysisof犘.犮犪犫犾犻狀,oneuniquese
quenceencoding犌犈犛wasdiscoveredandtheprimersforPCRweredesignedfromit,thefullength犌犈犛
cDNAwasclonedusingRTPCRstrategyanditsbioinformaticsanalysishasbeendone.Geneexpression
profileof犘犮犌犈犛1inleavesandstemsofdifferentdevelopmentstagesoffourcultivarswasevaluatedusing
quantitativereversetranscriptionpolymerasechainreaction(qRTPCR).Theresultsshowedthatthegene
犌犈犛in犘.犮犪犫犾犻狀,namedas犘犮犌犈犛1,accessionnumberKF926075inGenBank,containsa1734bpopen
readingframeandencodesapredictedproteinof577aminoacids.Phylogeneticanalysisindicatedthatthe
aminoacidsencodedby犌犈犛1of犘.犮犪犫犾犻狀wereclosesttothatof犗犮犻犿狌犿犫犪狊犻犾犻犮狌犿.PcGESproteinwas
locatedinchloroplast,notransmembranedistrict.qRTPCRanalysisindicatedthat犘犮犌犈犛1mainlyex
pressedinleaves,andthehighestexpressionwasinoldleaves.Theexpressionpatternanalysisof犘犮犌犈犛1
amongfourcultivarsindicatedthattheexpressionpatternof犘.犮犪犫犾犻狀(Blanco)Benth.cv.狊犺犻狆犪犻犲狀狊犻狊
wassimilarto犘.犮犪犫犾犻狀(Blanco)Benth.cv.犵犪狅狔犪狅犲狀狊犻狊,whilethatof犘.犮犪犫犾犻狀(Blanco)Benth.cv.
犺犪犻狀犪狀犵犲狀狊犻狊wassimilarto犘.犮犪犫犾犻狀(Blanco)Benth.Thisstudyprovidedafoundationforexploringthe
mechanismofterpenoidbiosynthesisin犘.犮犪犫犾犻狀plants.
犓犲狔狑狅狉犱狊:犘狅犵狅狊狋犲犿狅狀犮犪犫犾犻狀;geraniolsynthase;terpenoidssynthesis
  XYZ[\(geraniolsynthase,GES)]XYZ
^_`aSbcdef,
]ÝÞßgh_G[_
klfmn。2007à,áâz*%ãE!äåS
_æçè釭žê뻼|}

‰|}ìíîï
­žXYZ[,
Ìðñ!äåòIhÔêëfó
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ö¨Xõf÷øu|}!äåùI‡

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ã!"#
[1]。
XYZ]$ÿw2F#$

X%#
$òIXõfÉe&%_G

úÃ$geranyl
diphosphate(GDP)šXYZ[\fLF(I_X
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ú

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tX
[犘狅犵狅狊狋犲犿狅狀犮犪犫犾犻狀(Blanco)Benth]·
+^*@A9,#$

á~9é2
[9],
]

tXBô
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Fig.1 Synthesisprocessofgeraniol[12]
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1 n%ÑD„
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VS2W

’“ÕVtX
[犘.犮犪犫犾犻狀 (Blanco)
Benth.cv.犺犪犻狀犪狀犵犲狀狊犻狊]Y,”n•é–g—˜f
H™šS
,`
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1.2 QR
1.2.1 犚犖犃ST “-75℃HvfY,š180~
200℃§¨`f8©SF—˜ª«G8¬,”n
­éDEPC®¯`f°±²S,³—˜OP`,~
100mgn%1mL´µf¶·¸é…—Trizol,(
¹fغ~»Ú¼
(TiangenDP421)Š‹。1%½
¾¿ÀDÁ˜™ÃRNA—,F-ÄG““
Å,
(Nanodrop2000c)™–ÃRNAÆÅÑÇÅ。
1.2.2 犮犇犖犃9U ÈÉʆÏ:OligodT(20
pmol/μL,RË|I$gmÌÍ)2μL;RNA
10μL;dNTPmix(25μmol/L)2μL;RNasefree
ddH2O12μL。ªÊ†ÃS65℃iÎ5min,“
Ï`›Sœe1mináe,EÈÉʆÏS¸é
(z´µ
:5×firststrandbuffer8μL;0.1μmol/L
DTT4μL;SuperscriptⅢÊuv\(200u/μL,Life
ÌÍ
)2μL;H2O2μL。ЪÃʆÏS42℃
50min,70℃15min,SPCRÑeŠ‹Ò­ÓcD
NA[_。Êuvò$cDNA€š-20℃Hv。
1.2.3 ,;<= optXuvsS·
1591bpUnigene10850yz,‘F ORFÔÕ°Ö
7985¡              :;<=,J:tXXYZ[\|}…†K£¤G
™¬g­›®¯f?•ÔÕ°

‘FPrimer3
š×{,BE‚$ GES1F(5’AATTAAAC
TACCAAACAACATTA3’)Ñ ÊE‚$GES1R
(5 ’AGTTTTTATGTACAAATCCACGCAT
3’)。PCRʆÏ:3μLÒ­ÓcDNA(Êuvò
$ØÙ10Ú)·ÒÛ;2.5μLLAPCRbuffer;
2μLBEKÊE‡j‚$(10mmol/L,eÕIbI
$ba+QÜÝgmÌÍ[_
);0.25μLLA犜犪狇
DNAÞ[\(ßxàI$gmÌÍ);FÄáâ°H
GªÃãä25μL。PCRʆåæ:94℃iÎ
5min;94℃iÎ30s,57℃çè30s,72℃éê
90s,30›ëÝ;72℃éê10min。§¨˜™:“
PCRò$5μL,F1%½¾¿Á˜™。ªeì
PCRò$íD,ñFÀDî{´µï(ßxàI$
gmÌÍ
)`
ðî{

î{ayñp´µï»Ú¼
Š‹

c“4.5μLî{ò$,…†òpMD19Tó
Ã

ßxàI$gmÌÍ
)`
ôõö

ªõöò$u
éDH5ᣤd0¥,ü÷zø,šùúûÎü
ÛeŠ‹;΅†ý’

c“4~8›Š‹á—
PCRþ,` c“2›;΅†Š‹ÿE™y(
RS!"ÑI$+QgmÌÍ
)。
1.2.4 VWXYZ[\]AB #ª"™$fy
zšNCBIwp%SŠ‹Blast&,Èؖ(h
|}fhp

ñFORFFinder(http://www.nc
bi.nlm.nih.gov/projects/gorf/)Š‹?•ÔÕ°Ö
™

Њ‹犘犮犌犈犛|}f­zG。±²¿
Àf¯&Î֙ƒFExPASyProteomicsServer
)*fš×b+Protparam(http://www.expasy.
ch/tools/protparam.html);PcGES¿À§,&
GpƒFš×b+ExPASyPROSITE(http://
www.expasy.ch/prosite/)Ñ!TT-I$+QK
ŽS±
(NCBI)š×b+(http://www.ncbi.nlm.
nih.gov/Structure/cdd/wrpsb.cgi)。š × HM
MOTOP(http://www.enzim.hu/hmmtop/html/
adv_submit.html)Š‹ÅÆÇ֙;š×G³|
´y z

. G Î G 
(http://web.expasy.org/
protscale);F HMMTOP(http://www.cbs.dtu.
dk/services/TMHMM/)˜™ÅƧ,;ñFSig
nalP4.0ServerŠ‹G/¿À֙(http://www.
cbs.dtu.dk/services/SignalP/);‘ F WOLFP
SORT(http://wolfpsort.org/)Š‹¿À–ÁK
¹Ö™

ñFInterProScan(http://www.ebi.ac.
uk/Tools/pfa/iprscan/)Š‹¿ÀH0§,È&。
ƒF MEGA6.06Cæt›f NJ„,1Š&2。
"gCæ3ć4»Ú

5ƒF6„7w

1.2.5 犘犮犌犈犛1,;?@AB “tX4›œ
žf8Y

_9Y

ÊY



_9¢ÑÊ¢Js
r

 eD„)“csrÃRNA1μg,ñFPrime
ScriptRTreagentKitWithgDNAEraser(Taka
ra)Š‹DNA:&ÑÊuv$òcDNAÒ­Ó,
uªcDNA N—ØÙ10ÚL·qPCRfÒÛ。á
actin(犃犆犜)|}L·t7,7;SYBRPremixEx
TaqTMⅡ(Takara)»Ú¼(ßxàI$gmÌÍ){
,‚$
:犘犮犃犆犜 |}e<‚$ 5GCTCCTAG
CAGCATGAAGATCA3,( < ‚ $ 5AGCAT
CAGCAGACAGCAATCAT3;犘犮犌犈犛1|}e<
‚$ 5GGAAGGATTTGAATGGGGAG3,(<
‚$5TGCTTGTACACCACTTGGGA3。qPCR
ʆš»=lightcycle480–—PCRÑe®_。Ê
†Ã20μL:SYBRpremixExTaqⅡ(2x)10μL,
BÊ ‚ $ c 0.8μL,cDNA Ò Û 2μL,H2O
6.4μL。qPCRʆayƒFØ„:95℃ÖiÎ
30s;95℃iÎ5s,60℃çèéê34s,ëÝw40;
ʆ§>`?@A‹BCD×ay

áH/fò
$f‡j€

á ActinL·t7,ñF2ΔΔCtD„
͖|}Œˆ£¤—

S7E$£¤—–·
“1”[13],£¤wpAFSigmaPlot10.0Š‹G。
2 §¨ºG
2.1 456犘犮犌犈犛1,;X<=
áÕVtXÃRNA·Òۊ‹FuvG$
cDNAyz,‘FRTPCR€$ò1å1800bp
HIfåW

ˆS€"$åWŠ‹î{

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u
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yz

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­›®¯f?•Ã,°

1734bp,±²577›³


*2)。ª‰|}µ¶·犘犮犌犈犛1,GenBank
¸v¹·KF926075。
2.2 犘犮犌犈犛1,;#N^_`aAB
犘犮犌犈犛1|}֙±²577›³|´,‘F
ExPASyProteomicsServer)*fš×b+Prot
paramˆ±²¿Àf¯&Ί‹Ö™G。J
™犘犮犌犈犛1fGHÓ·C3006H4727N791O868S24,GH
—·66.61kD,JÁK·5.88;WLÁM|(Asp+
Glu)·79,BÁM|(Arg+Lys)·73。‰¿Àf
ŸN–w·54.35,¾Ow·95.01,PGΏ
w·-0.257。š×SignalP4.0ServerCæG§
¨£ÚPcGES1·bG/¿À。WOLFPSORTÖ
898 ! " # $ % &                   36Q
*2 犘犮犌犈犛1|}f~cDNAKJRf³|´yz
Fig.2 ThefullengthcDNAanddeducedaminoacidsequenceof犘犮犌犈犛1
*3 ‘FInterProScanGPcGES1¿ÀfH0§,È
Fig.3 AnalysisofPcGES1conserveddomainsusingInterProScan
™£ÚPcGES1–ÁšYÂÃS(chlo:12.0,cy
to:1.0)。F HMMTOP֙PcGES1ÄÅÆÇ
È

†FprotscaleˆPcGES1¿Àf³|´yz/
.GÎ֙G§¨£Ú
,PcGES1ÿSÓÒ437
ÁfT³´+g½ËfGU2.700,.GνV;Ò
505ÁfW³´+g½XfGU-2.833,PGν
V

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PGγ|´ÿS.Gγ|´

·PG¿À

ñFInterProScanŠ‹¿ÀH0§
,È&

PYÉeg2›H0§,È,Ò63~
260·­›§,È,(›ÇÈ·ghÝ&\/ααÝ
jZÞ|u[\¿ÀÈ

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È

Ò249~574·_­›§,È,Ée·hjZ`
Þ[\Ⱥgh[\a,§[È

*3)。
2.3 犘犮犌犈犛1#N^_XbcdefAB
ÌGenBank¿Àwp%&PY,/ú,û
Ìzf#$犌犈犛|}Ÿÿ。Ì NCBIbbc¿
Àwp%
(Nr)S’“º犘犮犌犈犛1|}±²¿ÀŒ
ÔÎdËf6å¿Àyz,ƒF MEGA6.06Cæ,
Ft›NJ„,1Š&2。§¨(*4)£Ú,t
X犘犮犌犈犛1|}±²f³|´yzº»¼(犗犮犻
犿狌犿犫犪狊犻犾犻犮狌犿,Q6USK1.1)犌犈犛±²f³|´y
zޚ­e

кQfg
(犗犾犲犪犲狌狉狅狆犪犲犪,AFS59975.
1,AFI47926.1)、 5 ö (犆犪狋犺犪狉犪狀狋犺狌狊狉狅狊犲狌狊,
AFD64744.1)犌犈犛±²f³|´yzޚ­e。
9985¡              :;<=,J:tXXYZ[\|}…†K£¤G
S.ÏÐtX;G.ËetX;H.ÕVtX;Y.Ö×tX
*5 犘犮犌犈犛1|}štX4›œžSf•h£¤—
犘.犮犪犫犾犻狀(Blanco)Benth.cv.狊犺犻狆犪犻犲狀狊犻狊;G.犘.犮犪犫犾犻狀(Blanco)Benth.cv.犵犪狅狔犪狅犲狀狊犻狊;H .犘.犮犪犫犾犻狀(Blanco)
Benth.cv.犺犪犻狀犪狀犵犲狀狊犻狊;Y.犘.犮犪犫犾犻狀(Blanco)Benth
Fig.5 Spatiotemporalexpressionprofileof犘犮犌犈犛1infour犘.犮犪犫犾犻狀(Blanco)Benthcultivars
2.4 犘犮犌犈犛1X?@AB
‘F”•–—PCRD„ˆ犘犮犌犈犛1Š‹|}


§¨£Ú
:犘犮犌犈犛1štXfŸ œž、
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}ÉešYS£¤

ušËetX

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*4 犘犮犌犈犛1º…#$犌犈犛±²³|´yzqPl2
Thenumbersonthebranchesrepresentthereliabilitypercent
ofbootstrapvaluesbasedon1000replications;Thescalebar
representsgeneticdistance;TheaccessionNo.isgiveninbracket
Fig.4 Phylogenetictreeofaminoacidsequencesof犌犈犛1
between犘.犮犪犫犾犻狀(Blanco)Benth.andotherplants
X

ˆtX#†Ÿ iÁ&%_G¬—fG§
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,犘犮犌犈犛1
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犘犮犌犈犛1f£¤ºtXf$ž,Îg[1819]。
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