全 文 :Chinese Bulletin of Life Sciences
17 2
2005 4
Vol. 17, No. 2
Apr., 2005
510515
;
Q503;Q51 A
Protein microarray and proteomics
FEI Jia, MA Wen-Li*, ZHENG Wen-Ling
(Institute of Molecular Biology, Southern Medical University, Guangzhou 510515, China)
Abstract: Protein microarray technology has become a crucial tool for large-scale and high-throughput biology.
It allows fast, easy and parallel detection of thousands of addressable elements in a single experiment. This
article reviewed protein chips great potential in proteomics research. It has been applied to isolate, quantify
protein and analyse protein-protein, protein-small molecule interaction. Protein chip combinated with mass
spectrometry, biosensor technology expended its applicable scale. It also introduced the advance of proteome
chip and alive chip in proteomics research. Protein microarray plays an important role in proteomics research.
Key words: protein microarray; proteomics
1004-0374(2005)02-0132-05
2004-06-03 2004-07-14
39880032
( 1 9 6 4 ) ( 1 9 6 4 ) *
( 1 9 6 2 )
[1]
1
(two dimensional gel electrophoresis,
2DGE) (mass spectrometry, MS)
1.1 1975
[2]
pH (Isoelectric focusing);
SDS-PAGE
20 80 Bjellqvist [3]
pH pH
2DGE
2DGE
1.2
(bio-mass spectrometry)
(m/z)
20 80
(electrospray ionization ESI)
(matrix-assisted laser desorption ionization MALDI )[4~5]
2
Kodadek[6]
( )
(1 )
(2 )
(3) ELISA
3
3.1 2DGE
[7]
D N A
(1)
( ); (2)
-
von Eggeling [8]
3.2 Mendoza
[9] ELISA
96
96
36 8
96
134
13 824
ELISA
C C D ( c h a r g e
coupled device) AIDA
Bacarese-Hamilton [10]
5
IgG IgM
0.5pg ELISA 80%
Copeland [11]
ELISA
3.3
[12] Gray
[13]
(Cdc28p)
Cdc28p
3.4 (Lab-on-chip) DNA
[14] Chiem [15]
7.6cm .6cm
( 1 )
( 2 )
( 3 )
W o l f [ 1 6 ]
(microfluidic networks, microFNs) C
(CRP)
10 1
CRP 30 ng/ml
C R P
3.5 -
(surface enhanced laser desorption/ionization-
time of flight-mass spectrometry, SELDI-TOF-MS)
[17]
- -
- -DNA
(1)
(2) (
); (3)
( Western
)[18] Davies
[19] -
β (amyloid-β peptide A β)
-Aβ( )
-Aβ
Aβ
SELDI-TOF-MS
Aβ
Koopmann [20] SELDI
60
60 60
78% 97%
CA19-9(P<0.05)
CA19-9
3.6
Pharmacia Biotech
(biomolecular inter-
action analysis, BIA)
(surface plasmon resonance,SPR)
SPR
BIA
MALDI-TOF-MS
[ 2 1 ]
3.7
5 800
5 800
Zhu [22]
5 800
DNA
4
Zhu [22]
(proteome chip)
3.8
( )
Uetz [23]
6 000
(opening read frame
ORF) Gal-4
D N A -
RNA- 192
281 -
[24]
4
136
,
(2DGE) (MS)
/
[1] Dove A. Proteomics: translating genomics into products?
Nat Biotechnol, 1999, 17(3): 233~236
[2] O Farrell P H. High resolution two-dimensional electro-
phoresis of proteins. J Biol Chem, 1975, 250(10): 4007~4021
[3] Bjellqvist B,Ek K Righetti P G et al. Isoelectric focus-
ing in immobilized pH gradients: principle,methodology and
some applications. J Biochem Biophys Methods, 1982 , 6(4):
317~339
[4] Fenn J B Mann M, Meng C K, et al. Electrospray ioniza-
tion for mass spectrometry of large biomolecules. Science,
1989, 246:64~71
[5] Karas M, Hillenkamp F. Laser desorption ionization of pro-
teins with molecular masses exceeding 10 000 daltons . Anal
Chem, 1988, 60(20):2299~2301
[6] Kodadek T. Protein micriarray: prospects and problems.
Chem Biol, 2001, 8(2):105~115
[7] Pennington S R, Dunn M J. : [M].
. 2002.172~176
[8] von Eggeling F, Davies H, Lomas L, et al. Tissue-specific
microdissection coupled with Protein Chip array
technologies: applications in cancer research. BioTechniques,
2000, 29(5): 1066~1070
[9] Mendoza L G, McQuary P, Mongan A, et al. High-through-
put microarray-based enzyme-linked immunosorbent assay
(ELISA). BioTechniques, 1999, 27(4):778~788
[10] Bacarese-Hamilton T, Mezzasoma L, Ardizzoni A,et al. Se-
rodiagnosis of infectious diseases with antigen microarrays.
J Appl Microbiol, 2004, 96(1):10~17
[11] Copeland S, Siddiqui J, Remick D.Direct comparison of tra-
ditional ELISAs and membrane protein arrays for detection
and quantification of human cytokines. J Immunol Methods,
2004, 284:99~106
[12] Cahill D J. Protein and antibody arrays and their medical
application. J Immunol Methods, 2001, 250:81~91
[13] Gray N S, Wodicka L, Thunnissen WH,et al. Exploiting
chemical libraries, structure, and genomics in the the search
for kinase inhibitors. Science, 1998, 281: 533~538
[14] Emili A Q, Cagney G. Large-scale functional analysis using
peptide or protein arrays. Nat Biotechnol, 2000, 18(4):
393~397
[15] Chiem N H, Harrison D J. Microchip systems for
immunoassay: an integrated immunoreactor with electro-
phoretic separation for serum theophylline determination.
Clin Chem, 1998, 44(3):591~598
[16] Wolf M, Juncker D, Michel B, et al.Simultaneous detection
of C-reactive protein and other cardiac markers in human
plasma using micromosaic immunoassays and self-regulat-
ing microfluidic networks. Biosens Bioelectron, 2004 , 19
(10): 1193~1202
[17] Merchant M, Weinberger S R. Recent advancements in sur-
face-enhanced laser desorption/ ionization-time of flight-
mass spectrometry. Electrophoresis, 2000, 21(6):1164~1177
[18] MacBeath G, Schreiber S L. Printing proteins as microarray
for high-throughput function determination. Science, 2000,
289(5485):1760~1763
[19] Davies H, Lomas L, Austen B. Profiling of amyloid β pep-
tide variants using SELDI Protein Chip arrays.
BioTechniques, 1999, 27(6):1258~1261
[20] Koopmann J, Zhang Z, White N, et al. Serum diagnosis of
pancreatic adenocarcinoma using surface-enhanced laser de-
sorption and ionization mass spectrometry. Clin Cancer
Res, 2004, 10(3):860~868
[21] Nelson R W, Nedelkov D, Tubbs K A, et al. Biosensor chip
mass spectrometry: a chip-based proteomics approach .
Electrophoresis, 2000, 21(6):1155~1163
[22] Zhu H, Bilgin M, Bangham R, et al. Global analysis of
protein activities using proteome chips. Science ,2001,293 :
2101~2105
[23] Uetz P, Giot L, Cagney G, et al. A comprehensive analysis
of protein-protein interactions in Saccharomyces cerevisiae.
Nature, 2000, 403(6770):623~627
[24] Uetz P. Two-hybrid arrays. Curr Opin Chem Biol, 2002, 6
(1):57~62
(ON01910)
2005 3 Cancer Cell Plk1
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